Extension of `data.frame`

Fast aggregation of large data (e.g. 100GB in RAM), fast ordered joins, fast add/modify/delete of columns by group using no copies at all, list columns, friendly and fast character-separated-value read/write. Offers a natural and flexible syntax, for faster development.


data.table

CRAN status R-CMD-check Codecov test coverage GitLab CI build status downloads CRAN usage BioC usage indirect usage Powered by NumFOCUS

data.table provides a high-performance version of base R's data.frame with syntax and feature enhancements for ease of use, convenience and programming speed.

The data.table project uses a custom governance agreement and is fiscally sponsored by NumFOCUS. Consider making a tax-deductible donation to help the project pay for developer time, professional services, travel, workshops, and a variety of other needs.


Why data.table?

  • concise syntax: fast to type, fast to read
  • fast speed
  • memory efficient
  • careful API lifecycle management
  • community
  • feature rich

Features

  • fast and friendly delimited file reader: ?fread, see also convenience features for small data
  • fast and feature rich delimited file writer: ?fwrite
  • low-level parallelism: many common operations are internally parallelized to use multiple CPU threads
  • fast and scalable aggregations; e.g. 100GB in RAM (see benchmarks on up to two billion rows)
  • fast and feature rich joins: ordered joins (e.g. rolling forwards, backwards, nearest and limited staleness), overlapping range joins (similar to IRanges::findOverlaps), non-equi joins (i.e. joins using operators >, >=, <, <=), aggregate on join (by=.EACHI), update on join
  • fast add/update/delete columns by reference by group using no copies at all
  • fast and feature rich reshaping data: ?dcast (pivot/wider/spread) and ?melt (unpivot/longer/gather)
  • any R function from any R package can be used in queries not just the subset of functions made available by a database backend, also columns of type list are supported
  • has no dependencies at all other than base R itself, for simpler production/maintenance
  • the R dependency is as old as possible for as long as possible, dated April 2014, and we continuously test against that version; e.g. v1.11.0 released on 5 May 2018 bumped the dependency up from 5 year old R 3.0.0 to 4 year old R 3.1.0

Installation

install.packages("data.table")

# latest development version (only if newer available)
data.table::update_dev_pkg()

# latest development version (force install)
install.packages("data.table", repos="https://rdatatable.gitlab.io/data.table")

See the Installation wiki for more details.

Usage

Use data.table subset [ operator the same way you would use data.frame one, but...

  • no need to prefix each column with DT$ (like subset() and with() but built-in)
  • any R expression using any package is allowed in j argument, not just list of columns
  • extra argument by to compute j expression by group
library(data.table)
DT = as.data.table(iris)

# FROM[WHERE, SELECT, GROUP BY]
# DT  [i,     j,      by]

DT[Petal.Width > 1.0, mean(Petal.Length), by = Species]
#      Species       V1
#1: versicolor 4.362791
#2:  virginica 5.552000

Getting started

Cheatsheets

Community

data.table is widely used by the R community. It is being directly used by hundreds of CRAN and Bioconductor packages, and indirectly by thousands. It is one of the top most starred R packages on GitHub, and was highly rated by the Depsy project. If you need help, the data.table community is active on StackOverflow.

A list of packages that significantly support, extend, or make use of data.table can be found in the Seal of Approval document.

Stay up-to-date

Contributing

Guidelines for filing issues / pull requests: Contribution Guidelines.

Reference manual

It appears you don't have a PDF plugin for this browser. You can click here to download the reference manual.

install.packages("data.table")

1.18.6.1 by Tyson Barrett, 2 months ago


https://r-datatable.com, https://Rdatatable.gitlab.io/data.table, https://github.com/Rdatatable/data.table


Report a bug at https://github.com/Rdatatable/data.table/issues


Browse source code at https://github.com/cran/data.table


Authors: Tyson Barrett [aut, cre] (ORCID: , Matt Dowle [aut] , Arun Srinivasan [aut] , Jan Gorecki [aut] , Michael Chirico [aut] , Toby Hocking [aut] , Benjamin Schwendinger [aut] (ORCID: , Ivan Krylov [aut] , Pasha Stetsenko [ctb] , Tom Short [ctb] , Steve Lianoglou [ctb] , Eduard Antonyan [ctb] , Markus Bonsch [ctb] , Hugh Parsonage [ctb] , Scott Ritchie [ctb] , Kun Ren [ctb] , Xianying Tan [ctb] , Rick Saporta [ctb] , Otto Seiskari [ctb] , Xianghui Dong [ctb] , Michel Lang [ctb] , Watal Iwasaki [ctb] , Seth Wenchel [ctb] , Karl Broman [ctb] , Tobias Schmidt [ctb] , David Arenburg [ctb] , Ethan Smith [ctb] , Francois Cocquemas [ctb] , Matthieu Gomez [ctb] , Philippe Chataignon [ctb] , Nello Blaser [ctb] , Dmitry Selivanov [ctb] , Andrey Riabushenko [ctb] , Cheng Lee [ctb] , Declan Groves [ctb] , Daniel Possenriede [ctb] , Felipe Parages [ctb] , Denes Toth [ctb] , Mus Yaramaz-David [ctb] , Ayappan Perumal [ctb] , James Sams [ctb] , Martin Morgan [ctb] , Michael Quinn [ctb] , @javrucebo [ctb] (GitHub user) , Marc Halperin [ctb] , Roy Storey [ctb] , Manish Saraswat [ctb] , Morgan Jacob [ctb] , Michael Schubmehl [ctb] , Davis Vaughan [ctb] , Leonardo Silvestri [ctb] , Jim Hester [ctb] , Anthony Damico [ctb] , Sebastian Freundt [ctb] , David Simons [ctb] , Elliott Sales de Andrade [ctb] , Cole Miller [ctb] , Jens Peder Meldgaard [ctb] , Vaclav Tlapak [ctb] , Kevin Ushey [ctb] , Dirk Eddelbuettel [ctb] , Tony Fischetti [ctb] , Ofek Shilon [ctb] , Vadim Khotilovich [ctb] , Hadley Wickham [ctb] , Bennet Becker [ctb] , Kyle Haynes [ctb] , Boniface Christian Kamgang [ctb] , Olivier Delmarcell [ctb] , Josh O'Brien [ctb] , Dereck Mezquita [ctb] , Michael Czekanski [ctb] , Dmitry Shemetov [ctb] , Nitish Jha [ctb] , Joshua Wu [ctb] , Iago Giné-Vázquez [ctb] , Anirban Chetia [ctb] , Doris Amoakohene [ctb] , Angel Feliz [ctb] , Michael Young [ctb] , Mark Seeto [ctb] , Philippe Grosjean [ctb] , Vincent Runge [ctb] , Christian Wia [ctb] , Elise Maigné [ctb] , Vincent Rocher [ctb] , Vijay Lulla [ctb] , Aljaž Sluga [ctb] , Bill Evans [ctb] , Reino Bruner [ctb] , @badasahog [ctb] (GitHub user) , Vinit Thakur [ctb] , Mukul Kumar [ctb] , Ildikó Czeller [ctb] , Manmita Das [ctb] , Tarun Thammisetty [ctb] , Marco Colombo [ctb] , Tim Taylor [ctb]


Documentation:   PDF Manual  


MPL-2.0 | file LICENSE license


Imports methods

Suggests bit64, bit, R.utils, xts, zoo, yaml, knitr, markdown


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Suggested by AMR, BEDMatrix, BGData, BTM, BayesSUR, CRMetrics, Certara.DarwinReporter, Certara.Xpose.NLME, ClustAssess, ComplexUpset, CopernicusDEM, DatabaseConnector, Durga, Dyn4cast, EWSmethods, GTFSwizard, GaussSuppression, HCUPtools, HVT, INLAspacetime, ISPAT3D, LBDiscover, LMMstar, Lahman, LambertW, Largevars, LocalControl, LogicForest, MatrixExtra, MetricGraph, MicroMoB, MoBPS, NSR, OptimalBinningWoE, PeakSegOptimal, PhysicalActivity, PhytoIn, PortfolioAnalytics, ProjectTemplate, RAINBOWR, RTransferEntropy, Rblpapi, RcmdrPlugin.WorldFlora, Rdatasets, SLEMI, SSBtools, Seurat, ShinyItemAnalysis, SightabilityModel, SmallCountRounding, Sojourn, SurprisalAnalysis, SynthesizerPlus, TextMiningGUI, TrialSimulator, WQM, WVPlots, WebAnalytics, WorldFlora, actimetrics, actisomni, adjustedCurves, adlaplace, analyzer, aplotExtra, arcgisgeocode, arcgisutils, autoslider.core, azr, basetable, bclogit, bigstatsr, bikeshare14, bpcp, bysykkel, catcont, causalOT, cayleyR, cdid, cfr, cheapr, checkmate, chem.databases, cmsaf, collapse, colorDF, conText, constructive, corrselect, countries, cppSim, cryptoQuotes, dang, datapackage, datapasta, dataprep, datarobot, datasetjson, dataverifyr, datawizard, dbcturbo, dbi.table, decimal, denvax, drake, ecospace, ecotox, editbl, effClust, envalysis, epanetReader, epiworldR, epm, eventglm, factor256, fastai, fastplyr, fereg, filecacher, finbif, fixest, flexsynth, flowTraceR, flps, foresty, forrest, fst, future.tests, gbif.range, geobr, gfpop, ggInterval, ggfixest, ggpedigree, gmeans, googleVis, grandR, gsDesign, gtfsrealtime, gustave, h2o, handlr, harmony, hbamr, heaping, hermiter, heteroTests, highdir, htetree, hydropeak, ie2miscdata, iemisctext, implicitMeasures, ineAtlas, inplace, installr, interface, ipeaplot, itsadug, ivmte, jab.adverse.reactions, joinspy, kalmanfilter, kgraph, kimfilter, lava, lavaSearch2, lay, lazytrade, leiden, lfe, lgr, limorhyde, liver, measles, medicalcoder, mergen, metamer, micemd, milr, misha, mixvlmc, mrgsolve, multinets, multiscape, nanotime, ncdfCF, netCoin, nhppp, nlmixr2est, nlmixr2plot, nlmixr2save, nomads, onlineforecast, onsr, origin, outliertree, padr, pagoda2, pander, parallelMap, pedalfast.data, pedbp, pins, plotHMM, pmcalibration, pmml, pointblank, preventr, primer, prioriactions, privacyR, prnsamplr, qbrms, qs2, r2glmm, radiatR, randomForestSRC, raqs, rdhs, rdwd, read.gt3x, readyomics, recometrics, rehh, remotePARTS, reservr, rotor, rpivotTable, rstanarm, rtemis.draw, rtop, sequoia, skimr, sportyR, staggeredGMM, sticky, stringmagic, targeted, tbl.now, tcplfit2, telegramR, textrecipes, tidypopgen, tidypredict, tidyr, tidysdm, tidytext, tiledb, tinycodet, tinytable, tinytrail, tsdb, umx, unifed, unnest, vaersNDvax, vaersvax, versioning, vtreat, weightedsurv, where, wmm, wrMisc, wrProteo, xfun, xlr, xpectr, xplorerr, zmisc.

Enhanced by dendextend, lintr, lubridate, repr, tind.


See at CRAN